Getting Started with Bioshift

Step-by-step instructions to get started with Bioshift on Windows 10/11. Download the executable, activate your license, and start building computational chemistry workflows.

Installation Process

Follow these steps to install Bioshift on your system.

System Requirements

  • Windows 10/11 (64-bit) - Windows only supported platform
  • 8GB RAM minimum, 16GB+ recommended
  • ~3GB free disk space for tools and resources
  • Optional: NVIDIA GPU with CUDA 11.0+ for Vina GPU acceleration

Get License & Download

  • 1Contact us at support@bioshift.space to get your license
  • 2Receive download link for Bioshift executable
  • 3Download the executable file (Bioshift.exe)
  • 4Place executable in a directory with write permissions

Run Bioshift Application

  • 1Double-click Bioshift.exe to start the application
  • 2Wait for the application to load (may take a few moments)
  • 3Enter your license key when prompted
  • 4Start building your first workflow

Dependencies & Components

Bioshift includes many scientific computing engines. Here's what's included and optional.

ToolDescriptionCategory
AutoDock Vina (CPU)Multiple Vina versions (1.1.2, 1.2.3-1.2.7) includedMolecular Docking
AutoDock Vina GPUCUDA-accelerated Vina 2.1 for high-throughput screeningMolecular Docking
GROMACSMolecular dynamics engine (2025.1 included)Molecular Dynamics
RDKitCheminformatics toolkit (integrated)Cheminformatics
OpenBabelMolecular format conversion (executables included)Cheminformatics

Troubleshooting

Common installation issues and their solutions.

Application won't start or shows error

Ensure you have administrator privileges when running Bioshift.exe. Try running as administrator.

License key not accepted

Contact support@bioshift.space to verify your license key. Make sure to copy the entire key without spaces.

Application is slow or unresponsive

Close other memory-intensive applications. Ensure you have at least 8GB RAM available. Restart your computer if needed.

GPU acceleration not working

Verify NVIDIA drivers and CUDA 11.0+ are installed. Check GPU compatibility with Vina GPU in Help → System Info.

Cannot save files or access directories

Ensure Bioshift.exe is placed in a directory with write permissions. Try running from C:\Bioshift\ or similar.

Windows security blocks the executable

Add Bioshift.exe to Windows Security exclusions. Right-click → Properties → Unblock if available.

Setup Complete?

Excellent! Launch Bioshift with `python main.py` or `run.bat`. Continue with the quick start tutorial to create your first workflow.